STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Coexpression
Experiments
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[Homology]
Score
Krac_7306Luciferase-like monooxygenase superfamily; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251; KEGG: tro:trd_1546 luciferase-like monooxygenase superfamily; SPTR: B9L054 Luciferase-like monooxygenase superfamily; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family. (315 aa)    
Predicted Functional Partners:
Krac_6972
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR006162:IPR020845:IPR 001242:IPR000873:IPR006163:IPR001031; KEGG: ava:Ava_1611 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; SPTR: Q3MCQ2 Amino acid adenylation; TIGRFAM: amino acid adenylation domain protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
   
 0.835
Krac_0981
LPPG domain protein containing protein; COGs: COG0391 conserved hypothetical protein; InterPro IPR002882:IPR010115; KEGG: rrs:RoseRS_1138 LPPG:FO 2-phospho-L-lactate transferase; PFAM: protein of unknown function UPF0052 and CofD; SPTR: A5USE2 LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: LPPG:FO 2-phospho-L-lactate transferase.
 
     0.776
Krac_0979
F420-dependent oxidoreductase; COGs: COG1478 conserved hypothetical protein; InterPro IPR002847:IPR008225; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; SPTR: A5USE0 Coenzyme F420-0 gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase; PFAM: F420-0:Gamma-glutamyl ligase; TIGRFAM: F420-0:gamma-glutamyl ligase.
 
     0.774
Krac_4766
Putative F420-dependent oxidoreductase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR019952:IPR016048; KEGG: fra:Francci3_3738 luciferase-like; PFAM: Luciferase-like, subgroup; SPTR: Q2J6K3 Luciferase-like; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.754
Krac_6390
InterPro IPR004378; KEGG: sen:SACE_1248 hypothetical protein; SPTR: A4F948 Mycobacterium tuberculosis paralogous family 11; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
  
  0.752
Krac_1964
InterPro IPR004378; KEGG: sro:Sros_4541 hypothetical protein; SPTR: C4EP02 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
  
  0.749
Krac_0983
Putative F420-dependent enzyme; InterPro IPR012349:IPR009002:IPR011576:IPR019920; KEGG: tro:trd_A0549 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: D1CAW9 PPOX class putative F420-dependent enzyme; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme.
  
     0.748
Krac_6299
Hypothetical protein; InterPro IPR004378:IPR002052; KEGG: mgi:Mflv_2238 hypothetical protein; SPTR: A4T8T4 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
  
  0.748
Krac_1524
Putative F420-dependent oxidoreductase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048:IPR011251:IPR019923; KEGG: fra:Francci3_2659 luciferase-like; PFAM: Luciferase-like, subgroup; SPTR: Q2J9M1 Luciferase-like; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2516 family.
  
     0.744
Krac_9866
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: nml:Namu_4740 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C8X813 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase.
  
     0.744
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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