STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7626InterPro IPR008217; KEGG: ttr:Tter_2719 protein of unknown function DUF125 transmembrane; PFAM: protein of unknown function DUF125 transmembrane; SPTR: D1CIN6 Putative uncharacterized protein; PFAM: VIT family. (194 aa)    
Predicted Functional Partners:
EFH88892.1
KEGG: bgl:bglu_2g12910 amino acid adenylation; SPTR: A3INW7 Amino acid adenylation.
   
 
 0.826
Krac_5823
KEGG: bgl:bglu_2g12910 amino acid adenylation; SPTR: C5AID5 Amino acid adenylation.
   
 
 0.826
Krac_6683
UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterProIPR009036:IPR001763:IPR000594:IPR007901:IPR 016040; KEGG: tro:trd_1309 molybdopterin biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; SMART: Rhodanese domain protein; SPTR: B9L1P7 Molybdopterin biosynthesis protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family.
    
  0.720
Krac_7625
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fre:Franean1_1806 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: A8LFE1 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
     
 0.589
EFH86334.1
Conserved hypothetical protein; COGs: COG5496 thioesterase; KEGG: sth:STH3036 hypothetical protein; SPTR: Q67JY1 Putative uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 184.70; PFAM: Thioesterase superfamily.
       0.518
Krac_9344
Putative signal transduction protein with CBS domains; COGs: COG2524 transcriptional regulator protein; InterPro IPR013785:IPR018527:IPR000644; KEGG: cag:Cagg_1614 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: B8GA00 CBS domain containing membrane protein; PFAM: CBS domain.
  
  
 0.486
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.441
hemH-2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.441
Krac_5884
COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015421:IPR015424:IPR016454:IPR000192; KEGG: cyt:cce_5234 aminotransferase, class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: B4VWV9 Aminotransferase, class V superfamily; PFAM: Aminotransferase class-V.
   
 
  0.436
Krac_6837
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 
  0.436
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.