STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7738Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR002104:IPR013762; KEGG: ate:Athe_1029 integrase family protein; PFAM: integrase family protein; SPTR: B9MR26 Integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (396 aa)    
Predicted Functional Partners:
Krac_3130
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR010998:IPR002104; KEGG: hau:Haur_5218 integrase family protein; PFAM: integrase family protein; SPTR: A9B931 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.709
EFH90623.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR013762:IPR002104; KEGG: det:DET0905 phage integrase family site specific recombinase; PFAM: integrase family protein; SPTR: Q3Z9Q6 Site-specific recombinase, phage integrase family; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.703
Krac_8586
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR010998:IPR002104; KEGG: drm:Dred_0370 phage integrase family protein; PFAM: integrase family protein; SPTR: A4J1G5 Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.697
Krac_3543
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR011010:IPR010998:IPR004107:IPR 002104; KEGG: ana:alr7203 integrase/recombinase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Q8YKT8 Integrase/recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.684
Krac_2364
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010:IPR010998; KEGG: apt:APA01_20200 phage DNA recombinase; PFAM: integrase family protein; SPTR: C7L4M5 Phage DNA recombinase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.683
Krac_0394
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR004107:IPR002104:IPR011010:IPR 010998; KEGG: cpo:COPRO5265_0041 tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: B5Y6L6 Tyrosine recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.679
Krac_2523
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR010998:IPR002104; KEGG: deb:DehaBAV1_0078 phage integrase family protein; PFAM: integrase family protein; SPTR: A5FP45 Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.674
Krac_3134
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR011010:IPR010998:IPR004107:IPR 002104; KEGG: rop:ROP_23510 putative transposase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C1B2H4 Putative transposase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.661
Krac_7737
Phage transcriptional regulator, AlpA; InterPro IPR009061:IPR010260:IPR010093; KEGG: noc:Noc_0665 excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory; SPTR: B0MZX2 Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory protein (AlpA); TIGRFAM: DNA binding domain, excisionase family.
       0.648
Krac_7878
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR000209:IPR011010:IPR010998:IPR002104:IPR 013762; KEGG: deb:DehaBAV1_0078 phage integrase family protein; PFAM: integrase family protein; SPTR: A5FP45 Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.646
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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