STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7772CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: bpd:BURPS668_A0166 rhs element Vgr protein; PFAM: CHAP domain containing protein; SPTR: A3NFQ1 Rhs element Vgr protein; PFAM: CHAP domain. (834 aa)    
Predicted Functional Partners:
EFH90424.1
Hypothetical protein; InterPro IPR001305; KEGG: fps:FP2172 hypothetical protein; SPTR: A6H1K9 Putative uncharacterized protein.
 
 
   0.791
EFH90727.1
TPR repeat-containing protein; InterProIPR019734:IPR013026:IPR001440:IPR011717:IPR 013105:IPR011990; KEGG: rca:Rcas_3987 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: A7NR24 Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat.
 
   
 0.774
Krac_9108
InterPro IPR001254:IPR009003; KEGG: nca:Noca_2395 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: A1SJB5 Peptidase S1 and S6, chymotrypsin/Hap; PFAM: Trypsin.
  
 
   0.773
Krac_9138
SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: ttr:Tter_0696 SMC domain protein; PFAM: SMC domain protein; SPTR: D1CFA7 SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain.
 
  
  0.772
Krac_8525
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: A7NME4 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
  
  0.771
EFH89326.1
InterPro IPR004155:IPR011989:IPR016024; KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Q8YVS1 Alr1903 protein.
 
    0.770
Krac_0537
Putative FHA domain containing protein; KEGG: hypothetical protein; SPTR: A2ASS6 Titin.
  
     0.769
Krac_1574
KEGG: hypothetical protein; SPTR: A2AT56 Titin (Fragment).
  
     0.769
Krac_6827
Competence/damage-inducible protein CinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR008136:IPR001453; KEGG: mta:Moth_0735 competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; SPTR: Q2RKI6 Putative competence-damage inducible protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-ter [...]
     
 0.764
EFH89037.1
KEGG: cag:Cagg_1035 hypothetical protein; SPTR: B8G6L2 Putative uncharacterized protein.
 
 
   0.761
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.