STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7849COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cag:Cagg_1960 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B8GBN8 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; TIGRFAM: UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. (407 aa)    
Predicted Functional Partners:
EFH88580.1
Sugar isomerase (SIS); COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: tcu:Tcur_4583 putative sedoheptulose 7-phosphate isomerase; PFAM: sugar isomerase (SIS); SPTR: D1A5B9 Putative sedoheptulose 7-phosphate isomerase; PFAM: SIS domain.
 
 
 0.870
EFH89515.1
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterProIPR011004:IPR016055:IPR017441:IPR005835:IPR 001451:IPR005844:IPR005845; KEGG: cag:Cagg_3774 nucleotidyl transferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: B8GB10 Nucleotidyl transferase; P [...]
 
 0.845
Krac_2104
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR017810:IPR003737; KEGG: hau:Haur_3024 LmbE family protein; PFAM: LmbE family protein; SPTR: C0UD07 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D -glucopyranosidedeacetylase; PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase.
  
 
  0.717
Krac_6830
InterPro IPR012336; KEGG: sgr:SGR_4891 hypothetical protein; SPTR: B5G7S2 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain.
  
     0.689
Krac_8462
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: hau:Haur_3024 LmbE family protein; PFAM: LmbE family protein; SPTR: A9B4T9 LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase.
  
 
  0.661
Krac_8491
KEGG: ttr:Tter_0754 hypothetical protein; SPTR: D1CFG5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3090).
  
     0.650
EFH89617.1
TPR repeat-containing protein; InterPro IPR019734:IPR013026:IPR001440:IPR011990; KEGG: TPR Domain containing protein; PFAM: TPR repeat-containing protein; SPTR: A0YWU0 TPR repeat protein; PFAM: Tetratricopeptide repeat.
    
 0.645
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.613
Krac_2832
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR017853:IPR006047:IPR013781:IPR006589; KEGG: npu:Npun_R6403 glycoside hydrolase family protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: B4VXE6 Alpha amylase, catalytic domain subfamily, putative; PFAM: Alpha amylase, catalytic domain.
   
 0.613
EFH88919.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR006162:IPR020845:IPR001242:IPR 000873:IPR006163:IPR009081:IPR020459; KEGG: npu:Npun_F2181 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: Q9RAH1 NosD; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
 
 
 0.564
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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