STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7898KEGG: dde:Dde_1117 hypothetical protein; SPTR: Q313H8 Putative uncharacterized protein. (109 aa)    
Predicted Functional Partners:
Krac_7896
KEGG: hypothetical protein; SPTR: Q9YJX6 P270 nonstructural polyprotein.
       0.509
Krac_7897
KEGG: dka:DKAM_0545 protein of unknown function DUF95, transmembrane; SPTR: B6QKV2 C2H2 finger domain protein, putative.
       0.509
Krac_7899
Hypothetical protein; KEGG: ajs:Ajs_2195 phage transcriptional regulator, AlpA; SPTR: B0NN77 Putative uncharacterized protein; TIGRFAM: DNA binding domain, excisionase family.
       0.489
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.