STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8036InterPro IPR009272; KEGG: afo:Afer_0227 protein of unknown function DUF929; PFAM: protein of unknown function DUF929; SPTR: C7M2F2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF929). (340 aa)    
Predicted Functional Partners:
Krac_8037
Hypothetical protein; KEGG: oih:OB3014 iron-sulphur-binding reductase.
       0.723
Krac_8035
Hypothetical protein; KEGG: ami:Amir_1602 exonuclease RNase T and DNA polymerase III; SPTR: C6WBI3 Exonuclease RNase T and DNA polymerase III.
       0.540
Krac_8038
KEGG: cbe:Cbei_4367 DNA ligase-like protein; SPTR: A6M1J7 DNA ligase-like protein; PFAM: RNA ligase.
       0.451
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.