STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8053COGs: COG0248 Exopolyphosphatase; InterPro IPR003695:IPR007899; KEGG: plt:Plut_2062 exopolyphosphatase, putative; PFAM: Ppx/GppA phosphatase; CHAD domain containing protein; SPTR: C6MKS5 Ppx/GppA phosphatase; PFAM: CHAD domain; Ppx/GppA phosphatase family. (486 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.955
Krac_8307
TGS domain protein; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR004095:IPR002912:IPR011579:IPR012676; KEGG: tro:trd_1711 GTP pyrophosphokinase; PFAM: TGS domain protein; amino acid-binding ACT domain protein; ATPase; SPTR: B1Y0M3 (P)ppGpp synthetase I, SpoT/RelA; PFAM: Archaeal ATPase; TGS domain.
  
 
 0.728
Krac_8663
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.728
Krac_8664
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.728
EFH88613.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660:IPR000463:IPR016898; KEGG: rrs:RoseRS_1635 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A5UTS4 Polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2 (PPK2).
 
  
 0.647
Krac_7671
COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644:IPR010766:IPR001667:IPR004097; KEGG: hmo:HM1_0555 manganese-dependent inorganic pyrophosphatase; PFAM: DRTGG domain protein; CBS domain containing protein; phosphoesterase RecJ domain protein; DHHA2 domain protein; PRIAM: Inorganic diphosphatase; SMART: CBS domain containing protein; SPTR: A1HME9 Inorganic diphosphatase; PFAM: DRTGG domain; DHH family; DHHA2 domain; CBS domain.
    
  0.612
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.418
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.