STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8098Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104:IPR011010:IPR010998:IPR013762; KEGG: drm:Dred_0370 phage integrase family protein; PFAM: integrase family protein; SPTR: B2FUV8 Putative integrase/recombinase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (184 aa)    
Predicted Functional Partners:
Krac_0755
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR002104; KEGG: cpo:COPRO5265_0041 tyrosine recombinase XerD; PFAM: integrase family protein; SPTR: B5Y6L6 Tyrosine recombinase XerD; PFAM: Phage integrase family.
  
     0.774
Krac_2364
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010:IPR010998; KEGG: apt:APA01_20200 phage DNA recombinase; PFAM: integrase family protein; SPTR: C7L4M5 Phage DNA recombinase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.774
Krac_3130
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR010998:IPR002104; KEGG: hau:Haur_5218 integrase family protein; PFAM: integrase family protein; SPTR: A9B931 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.774
Krac_3543
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR011010:IPR010998:IPR004107:IPR 002104; KEGG: ana:alr7203 integrase/recombinase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Q8YKT8 Integrase/recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.774
Krac_9724
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR011010:IPR010998:IPR013762:IPR004107:IPR 002104; KEGG: dge:Dgeo_1703 phage integrase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Q1IXN6 Phage integrase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.773
Krac_6478
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR002104:IPR013762; KEGG: rop:ROP_72480 putative transposase for insertion sequence element; PFAM: integrase family protein; SPTR: C1B684 Putative transposase for insertion sequence element; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.772
Krac_3134
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR011010:IPR010998:IPR004107:IPR 002104; KEGG: rop:ROP_23510 putative transposase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C1B2H4 Putative transposase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.771
Krac_7701
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010; KEGG: cpo:COPRO5265_0041 tyrosine recombinase XerD; PFAM: integrase family protein; SPTR: B5Y6L6 Tyrosine recombinase XerD; PFAM: Phage integrase family.
  
     0.770
Krac_2970
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR011010:IPR010998:IPR004107:IPR002104:IPR 013762; KEGG: adg:Adeg_2179 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C9RDI4 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.769
Krac_3133
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR011010:IPR010998:IPR002104; KEGG: rha:RHA1_ro03200 transposase B; PFAM: integrase family protein; SPTR: C9D4N2 Putative transposase B; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.769
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.