STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8104Hypothetical protein; InterPro IPR009057; KEGG: rxy:Rxyl_3068 hypothetical protein; SPTR: Q1ARK2 Putative uncharacterized protein. (377 aa)    
Predicted Functional Partners:
EFH90686.1
KEGG: hoh:Hoch_0714 hypothetical protein; SPTR: A8U221 Predicted P-loop ATPase and inactivated derivative.
  
     0.600
EFH90810.1
KEGG: hoh:Hoch_0964 hypothetical protein; SPTR: A8U221 Predicted P-loop ATPase and inactivated derivative.
  
     0.596
Krac_8103
Hypothetical protein.
       0.550
Krac_2347
Hypothetical protein; InterPro IPR009057; KEGG: met:M446_6884 hypothetical protein; SPTR: B0UKM2 Putative uncharacterized protein; manually curated.
  
     0.511
EFH88645.1
Bifunctional DNA primase/polymerase; InterPro IPR015330; KEGG: hoh:Hoch_0964 hypothetical protein; PFAM: Bifunctional DNA primase/polymerase; SPTR: A8U221 Predicted P-loop ATPase and inactivated derivative; PFAM: Bifunctional DNA primase/polymerase, N-terminal.
  
     0.504
Krac_9377
KEGG: drt:Dret_2521 hypothetical protein; SPTR: C8X5V4 Putative uncharacterized protein.
  
     0.491
Krac_4799
Integrase catalytic region; InterPro IPR009057:IPR001584; KEGG: bpt:Bpet3736 putative transposase; PFAM: Integrase catalytic region; SPTR: A9I2N3 Putative transposase; PFAM: Integrase core domain.
  
     0.472
Krac_6962
Integrase catalytic region; InterPro IPR009057:IPR001584; KEGG: bpt:Bpet3736 putative transposase; PFAM: Integrase catalytic region; SPTR: A9I2N3 Putative transposase; PFAM: Integrase core domain.
  
     0.472
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.