STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8174Sporulation protein YhbH; COGs: COG2718 conserved hypothetical protein; InterPro IPR006698:IPR014230; KEGG: pth:PTH_1644 hypothetical protein; PFAM: protein of unknown function DUF444; SPTR: D1CA36 Sporulation protein YhbH; TIGRFAM: sporulation protein YhbH; PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; Belongs to the UPF0229 family. (380 aa)    
Predicted Functional Partners:
Krac_8173
SpoVR family protein; COGs: COG2719 conserved hypothetical protein; InterProIPR007390:IPR010982:IPR006141:IPR004042:IPR 006142:IPR003586; KEGG: rca:Rcas_1381 SpoVR family protein; PFAM: SpoVR family protein; SMART: Hedgehog/intein hint domain protein; SPTR: A7NJ11 SpoVR family protein; PFAM: SpoVR like protein; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region.
 
  
 0.994
Krac_8175
Putative serine protein kinase, PrkA; COGs: COG2766 Putative Ser protein kinase; InterPro IPR013153:IPR010650:IPR016230; KEGG: sth:STH788 serine protein kinase; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; SPTR: D1CA37 Putative serine protein kinase, PrkA; PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
  
 0.994
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.