Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Krac_8237 | Krac_8238 | Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196:IPR005829:IPR001958; KEGG: ade:Adeh_0133 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q2IM75 Major facilitator superfamily MFS_1 transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein. | KEGG: rpc:RPC_3590 hypothetical protein; SPTR: Q6N2F0 Putative uncharacterized protein. | 0.568 |
Krac_8238 | Krac_8237 | KEGG: rpc:RPC_3590 hypothetical protein; SPTR: Q6N2F0 Putative uncharacterized protein. | Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196:IPR005829:IPR001958; KEGG: ade:Adeh_0133 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q2IM75 Major facilitator superfamily MFS_1 transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein. | 0.568 |
Krac_8238 | Krac_8239 | KEGG: rpc:RPC_3590 hypothetical protein; SPTR: Q6N2F0 Putative uncharacterized protein. | Hypothetical protein; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4; manually curated; PFAM: Transposase DDE domain. | 0.413 |
Krac_8239 | Krac_8238 | Hypothetical protein; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4; manually curated; PFAM: Transposase DDE domain. | KEGG: rpc:RPC_3590 hypothetical protein; SPTR: Q6N2F0 Putative uncharacterized protein. | 0.413 |