STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8300COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR000534:IPR012280:IPR016040:IPR005676:IPR 012080; KEGG: chl:Chy400_0231 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: B9LHG1 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms); B [...] (360 aa)    
Predicted Functional Partners:
Krac_8301
COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR001341:IPR018042; KEGG: rrs:RoseRS_3079 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: A5UXT9 Aspartokinase; TIGRFAM: aspartate kinase; manually curated; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
 
 
 0.997
Krac_1142
COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR018042:IPR001341; KEGG: rrs:RoseRS_3079 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: A5UXT9 Aspartokinase; TIGRFAM: aspartate kinase; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
 
 0.993
EFH89628.1
COGs: COG0460 Homoserine dehydrogenase; InterPro IPR016040:IPR019811:IPR005106:IPR001342; KEGG: aba:Acid345_4165 homoserine dehydrogenase; PFAM: homoserine dehydrogenase NAD-binding; homoserine dehydrogenase; PRIAM: Homoserine dehydrogenase; SPTR: Q1IIY5 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase.
 
 0.945
EFH89069.1
COGs: COG0460 Homoserine dehydrogenase; InterPro IPR019811:IPR005106:IPR001342:IPR016040; KEGG: rrs:RoseRS_2987 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; PRIAM: Homoserine dehydrogenase; SPTR: A5UXJ8 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase.
  
 0.935
pgk
COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015911:IPR015824:IPR015901; KEGG: chl:Chy400_3055 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: B9LM50 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.919
EFH88594.1
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: hau:Haur_2503 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: A9AZJ7 Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; Belongs to the DapA family.
  
 
 0.860
EFH90140.1
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR013785:IPR002220; KEGG: dhd:Dhaf_1978 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: Q24RV9 Putative uncharacterized protein; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
  
 
 0.860
EFH89440.1
COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: deb:DehaBAV1_0751 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Q3ZXI1 Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.
  
 
 0.836
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
    
 0.807
Krac_9125
COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020828:IPR020829:IPR020832:IPR020831:IPR 020830:IPR006424:IPR016040; KEGG: sti:Sthe_1253 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: D1C371 Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phospha [...]
  
 0.771
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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