STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8305COGs: COG2187 conserved hypothetical protein; KEGG: sun:SUN_0860 hypothetical protein; SPTR: A6Q8K9 Putative uncharacterized protein. (446 aa)    
Predicted Functional Partners:
EFH89042.1
Beta-phosphoglucomutase; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010976:IPR010972:IPR006402:IPR005834; KEGG: ana:all1058 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q8YXZ7 All1058 protein; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase.
  
    0.850
Krac_8996
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.834
EFH88526.1
Protein of unknown function DUF101; COGs: COG1371 conserved hypothetical protein; InterPro IPR002804; KEGG: sat:SYN_02047 putative cytoplasmic protein; PFAM: protein of unknown function DUF101; SPTR: Q2LQH9 Hypothetical cytosolic protein; PFAM: Archease protein family (DUF101/UPF0211).
   
    0.830
Krac_5638
KEGG: cyc:PCC7424_2216 hypothetical protein; SPTR: B7KGG7 Putative uncharacterized protein.
   
    0.816
Krac_2023
COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: cyn:Cyan7425_1158 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B8HLQ2 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
  
  
 0.635
Krac_8304
COGs: COG2187 conserved hypothetical protein; InterPro IPR011009; KEGG: amr:AM1_1833 hypothetical protein; SPTR: B0CDC8 Putative uncharacterized protein.
 
    
0.568
EFH89205.1
Beta-phosphoglucomutase family hydrolase; COGs: COG0637 phosphatase/phosphohexomutase; InterProIPR005833:IPR005834:IPR010976:IPR006402:IPR 006439; KEGG: ttr:Tter_0876 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: D1CFT7 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily I [...]
  
    0.540
EFH90826.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.537
Krac_3333
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: pfs:PFLU2939 putative two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; PRIAM: Histidine kinase; SPTR: C3KB27 Putative two-component system sensor kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
    0.527
Krac_9018
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003018:IPR011712:IPR003594:IPR005467; KEGG: rxy:Rxyl_2612 GAF sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; ATP-binding region ATPase domain protein; PRIAM: Histidine kinase; SMART: GAF domain protein; SPTR: Q1ASU9 GAF sensor signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain.
   
    0.527
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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