STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8525Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: A7NME4 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D. (723 aa)    
Predicted Functional Partners:
Krac_1574
KEGG: hypothetical protein; SPTR: A2AT56 Titin (Fragment).
  
     0.772
EFH89326.1
InterPro IPR004155:IPR011989:IPR016024; KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Q8YVS1 Alr1903 protein.
  
     0.771
Krac_7772
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: bpd:BURPS668_A0166 rhs element Vgr protein; PFAM: CHAP domain containing protein; SPTR: A3NFQ1 Rhs element Vgr protein; PFAM: CHAP domain.
  
  
  0.771
Krac_5858
Protein of unknown function DUF524; InterPro IPR007505; KEGG: gka:GK1379 hypothetical protein; PFAM: protein of unknown function DUF524; SPTR: Q5L072 Hypothetical conserved protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524).
  
     0.770
Krac_9138
SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: ttr:Tter_0696 SMC domain protein; PFAM: SMC domain protein; SPTR: D1CFA7 SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain.
  
     0.770
Krac_2296
Amino acid permease-associated region; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841:IPR002293; KEGG: mva:Mvan_2217 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: A1T781 Amino acid permease-associated region; PFAM: Amino acid permease.
 
     0.768
EFH90424.1
Hypothetical protein; InterPro IPR001305; KEGG: fps:FP2172 hypothetical protein; SPTR: A6H1K9 Putative uncharacterized protein.
  
     0.767
Krac_6867
Protein of unknown function DUF524; InterPro IPR007505; KEGG: rca:Rcas_4062 hypothetical protein; PFAM: protein of unknown function DUF524; SPTR: A7NR98 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524).
  
     0.767
Krac_8418
InterPro IPR002790; KEGG: bcv:Bcav_1042 protein of unknown function DUF88; PFAM: protein of unknown function DUF88; SPTR: C5C0B7 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88.
  
     0.767
Krac_0803
Conserved hypothetical protein; COGs: COG0433 ATPase; KEGG: fal:FRAAL2645 hypothetical protein; SPTR: Q0RMG0 Putative uncharacterized protein; PFAM: Domain of unknown function DUF87.
  
     0.765
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.