STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8535KEGG: sru:SRU_1110 hypothetical protein; SPTR: Q2S3J3 Putative uncharacterized protein. (313 aa)    
Predicted Functional Partners:
Krac_8533
Hypothetical protein; KEGG: proteophosphoglycan ppg4; SPTR: A4HM87 Proteophosphoglycan ppg4; manually curated; PFAM: Putative transposase DNA-binding domain; Probable transposase.
       0.741
Krac_8534
Resolvase domain protein; COGs: COG2452 site-specific integrase-resolvase; InterPro IPR006119; KEGG: mar:MAE_62920 putative resolvase; PFAM: Resolvase domain; SPTR: B0JLB5 Putative resolvase; PFAM: Resolvase, N terminal domain.
       0.741
Krac_8532
KEGG: sru:SRU_1110 hypothetical protein; SPTR: Q2S3J3 Putative uncharacterized protein.
       0.404
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.