STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8612KEGG: sti:Sthe_1413 hypothetical protein; SPTR: B3TA20 Putative uncharacterized protein. (128 aa)    
Predicted Functional Partners:
Krac_8608
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003557:IPR002541; KEGG: tro:trd_1217 heme exporter protein C; PFAM: cytochrome c assembly protein; SPTR: B9L1F8 Heme exporter protein C; PFAM: Cytochrome C assembly protein.
       0.792
Krac_8609
COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: sti:Sthe_1411 cytochrome c-type biogenesis protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; SPTR: D1C3M9 Cytochrome c-type biogenesis protein CcmB; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB.
       0.792
Krac_8613
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
       0.792
Krac_8614
COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR003567:IPR003568:IPR002541; KEGG: sti:Sthe_1415 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: D1C3N3 Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF.
       0.792
Krac_8611
KEGG: tro:trd_0263 hypothetical protein; SPTR: B9KXS5 Putative uncharacterized protein.
       0.791
Krac_8610
Heme exporter protein CcmA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR005895:IPR003439:IPR003593; KEGG: sti:Sthe_1412 heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D1C3N0 Heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA.
       0.773
Krac_8615
CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
       0.726
Krac_8606
KEGG: rca:Rcas_0289 hypothetical protein; SPTR: A7NG35 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3054).
       0.541
Krac_8607
KEGG: sai:Saci_0824 hypothetical protein; SPTR: Q71AF3 Putative uncharacterized protein.
       0.541
Krac_8616
KEGG: ttr:Tter_0408 hypothetical protein; SPTR: D1CEH4 Putative uncharacterized protein.
       0.527
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.