STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8685Hypothetical protein; KEGG: mxa:MXAN_3850 putative general stress protein GsiB; SPTR: Q1D5P1 Putative general stress protein GsiB; PFAM: Small hydrophilic plant seed protein. (120 aa)    
Predicted Functional Partners:
EFH90630.1
KEGG: rrs:RoseRS_2140 hypothetical protein; SPTR: A5UV68 Putative uncharacterized protein.
  
     0.610
EFH89105.1
COGs: COG4469 Competence protein; InterPro IPR010330; KEGG: bha:BH2857 hypothetical protein; PFAM: Competence CoiA family protein; SPTR: C2QLA6 Putative uncharacterized protein; PFAM: Competence protein CoiA-like family.
  
     0.578
Krac_7566
KEGG: rca:Rcas_1731 hypothetical protein; SPTR: Q08UF7 Putative uncharacterized protein.
  
     0.555
Krac_8181
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR003953:IPR013027; KEGG: mac:MA1492 phytoene dehydrogenase family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Q8TQP8 Phytoene dehydrogenase family protein; PFAM: FAD dependent oxidoreductase.
  
     0.475
Krac_9851
KEGG: app:CAP2UW1_2761 hypothetical protein; SPTR: C7RTA9 Putative uncharacterized protein; PFAM: Dienelactone hydrolase family.
  
     0.425
EFH89326.1
InterPro IPR004155:IPR011989:IPR016024; KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Q8YVS1 Alr1903 protein.
  
     0.423
Krac_4731
Mu-like major head subunit gpT, prophage; InterPro IPR018774; KEGG: aav:Aave_2895 hypothetical protein; PFAM: Mu-like major head subunit gpT, prophage; SPTR: A1TR75 Putative uncharacterized protein; manually curated; PFAM: Mu-like prophage major head subunit gpT.
  
     0.422
EFH90721.1
COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941:IPR006311; KEGG: cai:Caci_2527 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C7PXJ2 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
    0.408
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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