STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8752InterPro IPR000551:IPR009061; KEGG: hoh:Hoch_3230 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: D0LTN8 Transcriptional regulator, MerR family; manually curated; PFAM: MerR family regulatory protein. (238 aa)    
Predicted Functional Partners:
Krac_6712
InterPro IPR013830; KEGG: cai:Caci_0117 hypothetical protein; SPTR: C7QHD3 Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.661
EFH89037.1
KEGG: cag:Cagg_1035 hypothetical protein; SPTR: B8G6L2 Putative uncharacterized protein.
 
   0.647
Krac_8525
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: A7NME4 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
   
 0.646
Krac_2885
COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: scl:sce1419 hypothetical protein; PFAM: peptidase M19 renal dipeptidase; SPTR: Q08YK2 Sphingolipid ceramide N-deacylase; PFAM: Membrane dipeptidase (Peptidase family M19).
  
     0.563
EFH90424.1
Hypothetical protein; InterPro IPR001305; KEGG: fps:FP2172 hypothetical protein; SPTR: A6H1K9 Putative uncharacterized protein.
  
   0.543
Krac_4586
COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: scl:sce1419 hypothetical protein; PFAM: peptidase M19 renal dipeptidase; SPTR: Q08YK2 Sphingolipid ceramide N-deacylase; PFAM: Membrane dipeptidase (Peptidase family M19).
  
     0.538
Krac_9033
KEGG: sti:Sthe_0589 hypothetical protein; SPTR: D1C1B0 Putative uncharacterized protein.
  
     0.530
Krac_8751
Hypothetical protein; InterPro IPR006311; KEGG: ada2-like protein; K11314 transcriptional adapter 2-alpha; SPTR: B3L3T9 Ada2-like protein, putative.
       0.529
Krac_8339
COGs: COG1276 Putative copper export protein; InterPro IPR007348:IPR008457:IPR014756:IPR014755; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CA49 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
   
 0.527
Krac_1574
KEGG: hypothetical protein; SPTR: A2AT56 Titin (Fragment).
  
     0.510
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.