STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8812COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR019734:IPR011990:IPR 011009:IPR000719:IPR013026:IPR017441:IPR017442:IPR001440:I PR013105; KEGG: rrs:RoseRS_1844 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; Tetratricopeptide repeat; SPTR: A5UUD0 Protein kinase; PFAM: Protein kinase domain. (678 aa)    
Predicted Functional Partners:
Krac_3265
COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR000719:IPR017442:IPR020635:IPR 002290; KEGG: rrs:RoseRS_3845 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: D1C8C5 Serine/threonine protein kinase; PFAM: Protein kinase domain.
 
   0.929
Krac_3451
COGs: COG0515 Serine/threonine protein kinase; InterProIPR019825:IPR020635:IPR002290:IPR000719:IPR 011009:IPR001245; KEGG: hau:Haur_2960 serine/threonine protein kinase with PASTA sensor(s); PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A9B3M6 Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain.
 
   0.929
Krac_4788
COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR000719:IPR020635:IPR002290:IPR 017442; KEGG: rrs:RoseRS_3845 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A5UZZ6 Serine/threonine protein kinase; PFAM: Protein kinase domain.
 
   0.928
Krac_8867
COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290:IPR011009:IPR000719:IPR017442; KEGG: sti:Sthe_0833 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: D1C203 Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain.
 
   0.927
Krac_3617
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441:IPR002290:IPR000719:IPR011009:IPR 017442; KEGG: aac:Aaci_1325 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: C9LUJ6 Serine/threonine-protein kinase PrkC; PFAM: Protein kinase domain.
 
   0.913
Krac_8811
COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: rca:Rcas_2392 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: A7NLS6 Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C.
 
   0.870
Krac_5220
COGs: COG0515 Serine/threonine protein kinase; InterPro IPR000719:IPR002290:IPR017442:IPR011009; KEGG: mxa:MXAN_2680 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: Q1D8X6 Serine/threonine protein kinase; PFAM: Protein kinase domain.
 
 
 
 0.849
Krac_7990
COGs: COG1716 FOG: FHA domain; InterPro IPR008984:IPR000253; KEGG: acp:A2cp1_3479 sigma54 specific transcriptional regulator, Fis family; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: B8J5E7 Sigma54 specific transcriptional regulator, Fis family; PFAM: FHA domain.
 
 0.845
Krac_8813
COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: rrs:RoseRS_2766 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C-like; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: A5UWY5 Protein phosphatase 2C domain protein; PFAM: Protein phosphatase 2C.
 
   0.841
Krac_9408
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: rmr:Rmar_0513 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: D0MEW5 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain.
  
 0.828
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.