STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8919COGs: COG5305 membrane protein; KEGG: sti:Sthe_2271 membrane protein-like protein; SPTR: D1C6R7 Membrane protein-like protein. (552 aa)    
Predicted Functional Partners:
Krac_3061
KEGG: hypothetical protein; SPTR: A9B6E4 Tetratricopeptide TPR_2 repeat protein.
  
     0.653
EFH89597.1
KEGG: ttr:Tter_1679 hypothetical protein; SPTR: D1CCS0 Putative uncharacterized protein.
 
     0.646
EFH90328.1
Hypothetical protein; KEGG: hau:Haur_0195 TPR repeat-containing protein; SPTR: A9B6E4 Tetratricopeptide TPR_2 repeat protein.
  
     0.636
Krac_8817
Protein of unknown function DUF2079, membrane; COGs: COG3463 membrane protein; InterPro IPR018650; KEGG: hau:Haur_4272 membrane protein-like protein; PFAM: Protein of unknown function DUF2079, membrane; SPTR: A9AY22 Membrane protein-like protein; PFAM: Predicted membrane protein (DUF2079).
  
     0.625
Krac_7621
Protein of unknown function DUF2079, membrane; COGs: COG3463 membrane protein; InterPro IPR018650; KEGG: rrs:RoseRS_4411 membrane protein-like protein; PFAM: Protein of unknown function DUF2079, membrane; SPTR: A5V1J1 Membrane protein-like protein; PFAM: Predicted membrane protein (DUF2079).
  
     0.624
EFH90403.1
Hypothetical protein; KEGG: ace:Acel_2034 integral membrane protein-like; SPTR: C6P8Y3 Putative uncharacterized protein; PFAM: Mannosyltransferase (PIG-V)).
 
     0.612
EFH90834.1
KEGG: mpd:MCP_0650 hypothetical protein; SPTR: C6P8Y3 Putative uncharacterized protein; PFAM: Mannosyltransferase (PIG-V)).
 
     0.603
EFH89609.1
Conserved hypothetical protein; COGs: COG5542 integral membrane protein; KEGG: mpd:MCP_0650 hypothetical protein; SPTR: Q0W7F4 Putative uncharacterized protein; PFAM: Mannosyltransferase (PIG-V)).
 
     0.587
Krac_1574
KEGG: hypothetical protein; SPTR: A2AT56 Titin (Fragment).
  
     0.581
Krac_9108
InterPro IPR001254:IPR009003; KEGG: nca:Noca_2395 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: A1SJB5 Peptidase S1 and S6, chymotrypsin/Hap; PFAM: Trypsin.
  
     0.581
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.