STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9109COGs: COG0723 Rieske Fe-S protein; InterPro IPR007301:IPR017941:IPR005805; KEGG: ace:Acel_0145 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; TQO small subunit DoxD; SPTR: A0LR60 Rieske (2Fe-2S) domain protein; PFAM: TQO small subunit DoxD; Rieske [2Fe-2S] domain. (376 aa)    
Predicted Functional Partners:
Krac_4219
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR001041:IPR013027:IPR001450:IPR012285:IPR 016040:IPR017900:IPR017896:IPR000759:IPR009051; KEGG: csc:Csac_0621 molybdopterin oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A4XH60 Molybdopterin oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
    
 0.837
Krac_7555
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR000759:IPR012285:IPR016040:IPR001041:IPR 017896:IPR013027:IPR001450:IPR009051:IPR017900; KEGG: csc:Csac_0621 molybdopterin oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A4XH60 Molybdopterin oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
    
 0.837
Krac_1239
Cyclic nucleotide-binding protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterProIPR000595:IPR001450:IPR017900:IPR018488:IPR 014710:IPR018490:IPR017896; KEGG: mmb:Mmol_1047 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: cyclic nucleotide-binding; SPTR: C5V5M5 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.
  
 
 0.787
EFH90138.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR013785:IPR000583:IPR006982:IPR002932:IPR 002489:IPR017932; KEGG: tro:trd_1105 glutamate synthase [nadph] large chain precursor; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: B9L0N4 Glutamate synthase [nadph] large chain; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
 
 0.772
Krac_7022
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763:IPR001307; KEGG: sti:Sthe_2134 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: D1C608 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
 
 0.769
Krac_9171
Cyclic nucleotide-binding protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterProIPR001450:IPR000595:IPR017896:IPR017900:IPR 018490:IPR014710; KEGG: mmb:Mmol_1047 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: cyclic nucleotide-binding; SPTR: C6WVK7 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.
  
 
 0.765
Krac_0543
KEGG: mba:Mbar_A1947 hypothetical protein; SPTR: Q46B56 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1271).
  
  0.757
Krac_8611
KEGG: tro:trd_0263 hypothetical protein; SPTR: B9KXS5 Putative uncharacterized protein.
    
  0.736
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.731
Krac_1590
COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: ttr:Tter_0078 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: D1CDJ4 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 
  0.717
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.