STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9169KEGG: gau:GAU_0120 hypothetical protein; SPTR: C1A3T5 Putative uncharacterized protein. (477 aa)    
Predicted Functional Partners:
Krac_9170
KEGG: sus:Acid_4311 hypothetical protein; SPTR: Q01YJ2 Putative uncharacterized protein.
       0.404
Krac_9171
Cyclic nucleotide-binding protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterProIPR001450:IPR000595:IPR017896:IPR017900:IPR 018490:IPR014710; KEGG: mmb:Mmol_1047 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: cyclic nucleotide-binding; SPTR: C6WVK7 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.
       0.404
Krac_9172
FHA domain containing protein; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR000253:IPR008984; KEGG: csc:Csac_0546 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: B9MN97 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FHA domain.
       0.404
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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