STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9302InterPro IPR002514; KEGG: gem:GM21_0401 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: Q2YZR0 Transposase; PFAM: Transposase. (98 aa)    
Predicted Functional Partners:
Krac_9301
Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR012337:IPR001584; KEGG: amr:AM1_A0193 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: Q08W20 Isrso8-transposase orfb protein; PFAM: Integrase core domain.
 
     0.688
Krac_9303
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.552
Krac_9299
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: app:CAP2UW1_1904 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: D0D8N0 Response regulator PleD (Stalked cell differentiation-controlling protein); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.452
Krac_9300
Hypothetical protein; KEGG: mva:Mvan_2217 amino acid permease-associated region; SPTR: A1T781 Amino acid permease-associated region.
       0.452
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.