STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9800Hypothetical protein. (51 aa)    
Predicted Functional Partners:
Krac_9801
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: sma:SAV_6224 periplasmic branched-chain amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: B5HQN4 Periplasmic branched-chain amino acid-binding protein; PFAM: Receptor family ligand binding region.
       0.757
Krac_9799
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ttr:Tter_0586 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1CEZ8 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
       0.603
Krac_9798
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR005829:IPR001851; KEGG: rxy:Rxyl_2030 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Q1AUF1 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
       0.483
Krac_9796
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: bxe:Bxe_C0098 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B5WLC3 ABC transporter related; PFAM: ABC transporter.
       0.451
Krac_9797
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: rrs:RoseRS_2978 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A5UXI9 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
       0.451
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.