Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Krac_9866 | Krac_9867 | Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: nml:Namu_4740 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C8X813 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase. | MULE transposase, conserved domain; InterPro IPR018289; KEGG: mno:Mnod_2584 transposase; PFAM: MULE transposase, conserved domain; SPTR: B8IE01 Transposase; PFAM: MULE transposase domain. | 0.433 |
Krac_9867 | Krac_9866 | MULE transposase, conserved domain; InterPro IPR018289; KEGG: mno:Mnod_2584 transposase; PFAM: MULE transposase, conserved domain; SPTR: B8IE01 Transposase; PFAM: MULE transposase domain. | Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: nml:Namu_4740 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C8X813 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase. | 0.433 |