STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89572.1Aminopeptidase; COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); KEGG: sus:Acid_3925 aminopeptidase; SPTR: Q01ZM3 Aminopeptidase; PFAM: Thermophilic metalloprotease (M29). (343 aa)    
Predicted Functional Partners:
Krac_9030
COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: ttr:Tter_1401 peptidase M29 aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: D1CBZ2 Peptidase M29 aminopeptidase II; PFAM: Thermophilic metalloprotease (M29).
  
     0.764
EFH89571.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR017441:IPR008271:IPR000719:IPR 017442:IPR020635:IPR002290; KEGG: rca:Rcas_0525 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A7NGR2 Serine/threonine protein kinase with TPR repeats; PFAM: Protein kinase domain; Domain of Unknown Function (DUF1080).
       0.465
EFH90557.1
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: nph:NP2494A protein N-acetyltransferase-like protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Q3IRA5 Protein N-acetyltransferase homolog; PFAM: Acetyltransferase (GNAT) family.
  
     0.438
Krac_6192
InterPro IPR011047; KEGG: sus:Acid_6257 hypothetical protein; SPTR: B9XCZ7 Putative uncharacterized protein.
  
     0.420
Krac_2060
Conserved hypothetical protein; InterPro IPR011047; KEGG: aba:Acid345_1484 hypothetical protein; SPTR: Q1IRL4 Putative uncharacterized protein.
  
     0.417
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.