STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_0081PFAM: transposase IS4 family protein; KEGG: hsl:OE6267F transposase (ISH8). (424 aa)    
Predicted Functional Partners:
Hmuk_0880
PFAM: Domain of unknown function DUF1850; KEGG: hma:rrnAC2579 hypothetical protein.
  
     0.643
Hmuk_2975
SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC0680 helicase.
  
     0.618
Hmuk_1913
KEGG: hma:rrnAC1432 dolichyl-phosphate-mannose- protein mannosyltransferase.
  
     0.570
Hmuk_2685
TIGRFAM: halocyanin domain protein; PFAM: blue (type 1) copper domain protein; KEGG: hma:rrnAC0510 halocyanin precursor-like.
  
     0.518
Hmuk_2512
KEGG: hma:rrnAC0548 cell division control protein 6 homolog 6.
  
     0.512
Hmuk_1856
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: hma:rrnAC3023 putative cobalamin biosynthesis protein.
  
     0.511
Hmuk_1552
KEGG: hma:rrnAC1432 dolichyl-phosphate-mannose- protein mannosyltransferase.
  
     0.504
Hmuk_2874
KEGG: hma:rrnAC3517 hypothetical protein.
  
     0.504
Hmuk_2752
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: hma:rrnAC0431 transmembrane oligosaccharyl transferase.
  
     0.477
Hmuk_0084
PFAM: glycosyl transferase group 1; KEGG: hma:pNG7395 glycosyltransferase.
 
     0.469
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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