STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_0240KEGG: hma:rrnAC2195 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Hmuk_0234
PFAM: flagella protein; Flagella accessory C family protein; KEGG: hma:rrnAC2191 flagella-related protein E.
       0.704
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.635
Hmuk_0238
KEGG: hma:rrnAC3524 hypothetical protein.
       0.628
Hmuk_0239
KEGG: hma:rrnAC3525 hypothetical protein.
       0.628
Hmuk_0237
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: hma:rrnAC2194 chemotaxis protein CheY.
       0.624
Hmuk_0241
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
       0.560
Hmuk_0233
PFAM: flagellin; KEGG: hma:rrnAC2190 flagellar protein F.
     
 0.519
Hmuk_0232
PFAM: flagellin; KEGG: hma:rrnAC2187 putative flagella-related protein G.
     
 0.508
Hmuk_0236
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: hma:rrnAC2193 CheA histidine kinase.
       0.482
Hmuk_0231
KEGG: hma:rrnAC2186 flagella-related protein H.
     
 0.418
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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