STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_0795PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: hma:rrnAC2699 putative inosine monophosphate dehydrogenase. (281 aa)    
Predicted Functional Partners:
Hmuk_0796
KEGG: hma:rrnAC2701 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
     
 0.867
Hmuk_0797
KEGG: hma:rrnAC2702 hypothetical protein.
       0.862
Hmuk_1776
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: hma:rrnAC1525 hypothetical protein.
 
    0.748
Hmuk_1908
Proteasome Rpn11 subunit JAMM motif protein; KEGG: hma:rrnAC1439 hypothetical protein.
  
 
 0.690
Hmuk_2227
PFAM: Protein of unknown function UPF0179; KEGG: hma:rrnAC1064 hypothetical protein; Belongs to the UPF0179 family.
  
    0.662
Hmuk_0864
PFAM: amino acid-binding ACT domain protein; KEGG: nph:NP1404A hypothetical protein.
  
   
 0.646
Hmuk_3182
PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: hma:rrnAC0210 putative RNA binding protein.
  
     0.625
Hmuk_3079
KEGG: hma:rrnAC1820 hypothetical protein.
  
     0.609
tiaS
Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.608
Hmuk_1059
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: hma:rrnAC3094 RecJ-like exonuclease.
  
   
 0.544
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.