STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_0921PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: hma:rrnAC2622 AsnC family transcriptional regulator. (151 aa)    
Predicted Functional Partners:
Hmuk_0922
PFAM: nitrogen regulatory protein P-II; KEGG: hma:rrnAC2621 nitrogen regulatory protein P- II; Belongs to the P(II) protein family.
     
 0.781
Hmuk_0923
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: hma:rrnAC2619 ammonium transporter.
     
 0.781
Hmuk_0928
Putative transcriptional regulator, AsnC family; SMART: regulatory protein AsnC/Lrp family; KEGG: hma:pNG7038 transcription regulator.
  
     0.687
Hmuk_0745
Putative transcriptional regulator, AsnC family; PFAM: Helix-turn-helix type 11 domain protein; SMART: regulatory protein AsnC/Lrp family; KEGG: hsl:OE2776F putative transcription regulator.
  
   
 0.601
Hmuk_1554
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: hma:rrnAC3365 transcription regulator.
  
     0.495
Hmuk_0920
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: hma:rrnAC2623 CheA histidine kinase.
       0.493
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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