STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_0960KEGG: hma:rrnAC2294 hypothetical protein. (301 aa)    
Predicted Functional Partners:
Hmuk_0959
KEGG: nph:NP5344A hypothetical protein.
       0.783
Hmuk_0958
Hypothetical protein.
       0.782
Hmuk_0956
KEGG: hma:rrnAC2399 hypothetical protein.
       0.696
Hmuk_0955
Hypothetical protein; KEGG: stp:Strop_3684 peptidase S1 and S6, chymotrypsin/Hap.
       0.694
Hmuk_0954
Hypothetical protein.
       0.686
Hmuk_0957
Hypothetical protein.
       0.686
Hmuk_0961
KEGG: rme:Rmet_5178 hypothetical protein.
       0.476
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.