Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Hmuk_2737 | Hmuk_2738 | Hypothetical protein. | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | 0.561 |
Hmuk_2737 | Hmuk_2739 | Hypothetical protein. | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | 0.561 |
Hmuk_2737 | Hmuk_2740 | Hypothetical protein. | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | 0.443 |
Hmuk_2738 | Hmuk_2737 | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | Hypothetical protein. | 0.561 |
Hmuk_2738 | Hmuk_2739 | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | 0.995 |
Hmuk_2738 | Hmuk_2740 | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | 0.698 |
Hmuk_2739 | Hmuk_2737 | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | Hypothetical protein. | 0.561 |
Hmuk_2739 | Hmuk_2738 | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | 0.995 |
Hmuk_2739 | Hmuk_2740 | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | 0.774 |
Hmuk_2740 | Hmuk_2737 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | Hypothetical protein. | 0.443 |
Hmuk_2740 | Hmuk_2738 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | PFAM: purine or other phosphorylase family 1; KEGG: hma:rrnAC0448 uridine phosphorylase. | 0.698 |
Hmuk_2740 | Hmuk_2739 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hma:rrnAC0444 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hma:rrnAC0446 cytidine deaminase. | 0.774 |