STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_2756PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: nph:NP1944A transport protein 57 (polysaccharide biosynthesis transport protein). (476 aa)    
Predicted Functional Partners:
Hmuk_1430
Nucleotide sugar dehydrogenase; KEGG: hsl:OE2524R UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
 
  
 0.815
Hmuk_1213
KEGG: afu:AF0323b dTDP-4-dehydrorhamnose 3,5- epimerase and related enzyme.
 
  
 0.789
Hmuk_1217
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: mem:Memar_0186 dTDP-glucose 4,6-dehydratase.
  
  
 0.751
Hmuk_1214
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: mst:Msp_1102 dTDP-glucose pyrophosphorylase.
  
  
 0.747
Hmuk_2757
PFAM: glycosyl transferase group 1; KEGG: hmo:HM1_2046 glycosy hydrolase family protein.
 
  
 0.736
Hmuk_2036
PFAM: transferase hexapeptide repeat containing protein; KEGG: rci:RCIX1920 transferase protein.
  
  
 0.719
Hmuk_2758
PFAM: glycosyl transferase group 1; KEGG: nph:NP1928A hexosyltransferase 4.
 
  
 0.652
Hmuk_1450
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: hsl:OE1018F sugar transferase.
 
  
 0.612
Hmuk_2754
PFAM: glycosyl transferase group 1; KEGG: hma:rrnAC0429 LPS glycosyltransferase.
 
  
 0.539
Hmuk_1471
PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: mja:MJ1061 capsular polysaccharide biosynthesis protein D.
  
  
 0.490
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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