STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsrKMembrane-bound menaquinol oxidoreductase, cytoplasmic ferredoxin subunit; KEGG: sfu:Sfum_1147 4Fe-4S ferredoxin, iron-sulfur binding. (534 aa)    
Predicted Functional Partners:
dsrM
Membrane-bound menaquinol oxidoreductase, cytochrome b subunit; PFAM: Nitrate reductase gamma subunit; KEGG: sfu:Sfum_1146 nitrate reductase, gamma subunit.
 
 
 0.994
dsrJ
Membrane-bound menaquinol oxidoreductase, cytochrome c subunit; KEGG: dde:Dde_2273 cytochrome c family protein.
 
    0.978
dsrP
Membrane-bound menaquinol oxidoreductase, transmembrane subunit; PFAM: Polysulphide reductase NrfD; KEGG: dvu:DVU1286 reductase, transmembrane subunit, putative.
 
  
 0.952
dsrO
Membrane-bound menaquinol oxidoreductase, periplasmic ferredoxin subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Twin-arginine translocation pathway, signal sequence; KEGG: dvl:Dvul_1778 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
    0.947
Dret_0234
KEGG: sfu:Sfum_1145 hypothetical protein.
 
     0.923
qmoC
KEGG: dma:DMR_05430 quinone-interacting membrane- bound oxidoreductase complex subunit C.
 
 
 0.910
dsrA
KEGG: dol:Dole_2669 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
 
 0.906
dsrB
KEGG: dol:Dole_2670 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
 
 0.904
Dret_1234
Carbon-monoxide dehydrogenase, catalytic subunit; KEGG: dma:DMR_25780 putative carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
      
 0.852
dsrC
KEGG: dma:DMR_15890 sulfite reductase gamma subunit; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein.
 
 
 
 0.808
Your Current Organism:
Desulfohalobium retbaense
NCBI taxonomy Id: 485915
Other names: D. retbaense DSM 5692, Desulfohalobium retbaense DSM 5692, Desulfohalobium retbaense str. DSM 5692, Desulfohalobium retbaense strain DSM 5692
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