STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dret_0863TIGRFAM: MJ0042 family finger-like protein; KEGG: dvu:DVU1589 hypothetical protein. (256 aa)    
Predicted Functional Partners:
Dret_0302
KEGG: dvl:Dvul_2167 hypothetical protein.
  
     0.770
Dret_1882
KEGG: dde:Dde_0121 hypothetical protein.
  
     0.758
Dret_2166
PFAM: ROSMUCR transcriptional regulator; KEGG: dma:DMR_34370 hypothetical protein.
  
     0.730
Dret_2005
KEGG: dde:Dde_2592 hypothetical protein.
  
     0.719
Dret_2004
KEGG: dvm:DvMF_0918 hypothetical protein.
  
     0.715
Dret_0908
PFAM: ROSMUCR transcriptional regulator; KEGG: dde:Dde_0303 MucR family transcriptional regulator.
  
     0.711
Dret_1864
KEGG: dvl:Dvul_1334 hypothetical protein.
  
     0.684
Dret_2009
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0799 metal dependent phosphohydrolase.
  
     0.670
Dret_2089
KEGG: dvl:Dvul_2064 ATP synthase protein I.
  
     0.656
Dret_0242
KEGG: dde:Dde_3773 hypothetical protein.
  
     0.649
Your Current Organism:
Desulfohalobium retbaense
NCBI taxonomy Id: 485915
Other names: D. retbaense DSM 5692, Desulfohalobium retbaense DSM 5692, Desulfohalobium retbaense str. DSM 5692, Desulfohalobium retbaense strain DSM 5692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.