node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dret_1396 | Dret_1427 | Dret_1396 | Dret_1427 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | 0.991 |
Dret_1396 | Dret_2290 | Dret_1396 | Dret_2290 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | 0.980 |
Dret_1396 | Dret_2404 | Dret_1396 | Dret_2404 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | DNA polymerase I; KEGG: dvm:DvMF_1713 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; Helix-hairpin- helix domain protein class 2; 5'-3' exonuclease. | 0.609 |
Dret_1396 | Dret_2471 | Dret_1396 | Dret_2471 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | KEGG: dde:Dde_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain. | 0.990 |
Dret_1396 | Dret_2477 | Dret_1396 | Dret_2477 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: dde:Dde_0628 DNA polymerase III, epsilon subunit. | 0.990 |
Dret_1396 | dnaX | Dret_1396 | Dret_0506 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.980 |
Dret_1396 | metG | Dret_1396 | Dret_0315 | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.523 |
Dret_1427 | Dret_1396 | Dret_1427 | Dret_1396 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | 0.991 |
Dret_1427 | Dret_2290 | Dret_1427 | Dret_2290 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | 0.977 |
Dret_1427 | Dret_2404 | Dret_1427 | Dret_2404 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | DNA polymerase I; KEGG: dvm:DvMF_1713 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; Helix-hairpin- helix domain protein class 2; 5'-3' exonuclease. | 0.572 |
Dret_1427 | Dret_2471 | Dret_1427 | Dret_2471 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | KEGG: dde:Dde_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain. | 0.990 |
Dret_1427 | Dret_2477 | Dret_1427 | Dret_2477 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: dde:Dde_0628 DNA polymerase III, epsilon subunit. | 0.960 |
Dret_1427 | dnaX | Dret_1427 | Dret_0506 | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.977 |
Dret_2290 | Dret_1396 | Dret_2290 | Dret_1396 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein. | 0.980 |
Dret_2290 | Dret_1427 | Dret_2290 | Dret_1427 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein. | 0.977 |
Dret_2290 | Dret_2404 | Dret_2290 | Dret_2404 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | DNA polymerase I; KEGG: dvm:DvMF_1713 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; Helix-hairpin- helix domain protein class 2; 5'-3' exonuclease. | 0.594 |
Dret_2290 | Dret_2471 | Dret_2290 | Dret_2471 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | KEGG: dde:Dde_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain. | 0.984 |
Dret_2290 | Dret_2477 | Dret_2290 | Dret_2477 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: dde:Dde_0628 DNA polymerase III, epsilon subunit. | 0.974 |
Dret_2290 | dnaX | Dret_2290 | Dret_0506 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.925 |
Dret_2290 | metG | Dret_2290 | Dret_0315 | KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.531 |