STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0032TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sfu:Sfum_0727 ammonium transporter. (462 aa)    
Predicted Functional Partners:
Dtox_0033
PFAM: nitrogen regulatory protein P-II; KEGG: lhk:LHK_01236 GlnB.
 
 
 0.986
Dtox_1017
PFAM: nitrogen regulatory protein P-II; KEGG: afw:Anae109_4397 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.968
Dtox_1020
PFAM: nitrogen regulatory protein P-II; KEGG: gur:Gura_2229 nitrogen regulatory protein P- II.
 
 
 0.968
Dtox_0047
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: nmu:Nmul_A0328 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain-containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain-containing protein; PAC repeat-containing protein; PAS domain-containing protein.
 
    
 0.815
Dtox_3758
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: bha:BH1728 glutamate synthase (large subunit).
 
  
 0.748
Dtox_1024
PFAM: nitrogen regulatory protein P-II; KEGG: dal:Dalk_1521 nitrogen regulatory protein P- II.
  
 
 0.680
Dtox_1025
PFAM: nitrogen regulatory protein P-II; KEGG: dvl:Dvul_3092 nitrogen regulatory protein P- II.
  
 
 0.680
Dtox_0404
PFAM: NifH/frxC-family protein; oxidoreductase/nitrogenase component 1; KEGG: dal:Dalk_0725 NifH/FrxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.565
Dtox_4328
Multi-sensor signal transduction histidine kinase; KEGG: bsu:BSU13530 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain-containing protein; ATP-binding region ATPase domain protein.
  
 
 0.433
Dtox_3834
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: ppd:Ppro_3150 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain-containing protein.
  
 
 0.422
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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