STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0075PFAM: Nitrate reductase gamma subunit; KEGG: ppd:Ppro_1535 nitrate reductase, gamma subunit. (289 aa)    
Predicted Functional Partners:
Dtox_0076
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: ppd:Ppro_1534 hypothetical protein.
 
 
 0.969
Dtox_0077
TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: dat:HRM2_22050 DsrC.
 
   
 0.913
Dtox_0079
KEGG: dal:Dalk_4301 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
   
 0.850
Dtox_0080
KEGG: dat:HRM2_42390 DsrB2; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
   
 0.824
Dtox_0074
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0113 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.793
Dtox_1282
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: dps:DP1009 Fe-S oxidoreductase.
 
 
 0.787
Dtox_3577
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sfu:Sfum_1048 adenylylsulfate reductase.
  
   
 0.776
Dtox_3322
KEGG: dal:Dalk_2376 hypothetical protein.
  
     0.764
Dtox_3578
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1047 adenylylsulfate reductase, beta subunit.
  
   
 0.759
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.756
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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