STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0334PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pag:PLES_58961 zinc transport protein ZnuC. (272 aa)    
Predicted Functional Partners:
Dtox_0335
PFAM: ABC-3 protein; KEGG: dds:Ddes_1010 ABC-3 protein.
 0.998
Dtox_0333
PFAM: periplasmic solute binding protein; KEGG: dds:Ddes_1008 periplasmic solute binding protein.
 
 
 0.996
Dtox_4182
PFAM: ABC-3 protein; transport system permease protein; KEGG: gme:Gmet_0493 hypothetical protein.
 0.992
Dtox_4184
PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.978
Dtox_4183
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1394 ABC transporter ATP-binding protein.
  
  
 
0.917
Dtox_1739
PFAM: natural resistance-associated macrophage protein; KEGG: gbm:Gbem_3239 natural resistance-associated macrophage protein.
   
  
 0.744
Dtox_0332
PFAM: ferric-uptake regulator; KEGG: bha:BH1396 FUR family transcriptional regulator; Belongs to the Fur family.
  
  
 0.611
Dtox_0337
PFAM: Protein of unknown function DUF1980; KEGG: baa:BA_2274 hypothetical protein.
       0.573
Dtox_0336
PFAM: permease; KEGG: bsu:BSU03250 hypothetical protein.
       0.557
Dtox_0338
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: swd:Swoo_3483 cobalamin synthesis protein P47K.
     
 0.496
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.