STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0362PFAM: O-methyltransferase family 2; KEGG: sus:Acid_0820 hydroxyneurosporene-O- methyltransferase. (356 aa)    
Predicted Functional Partners:
Dtox_0361
PFAM: flavin reductase domain protein FMN-binding; KEGG: pha:PSHAa2199 hypothetical protein.
 
     0.728
Dtox_1007
PFAM: O-methyltransferase family 2; KEGG: dat:HRM2_47060 SAM-dependent methyltransferase.
 
    0.721
Dtox_2674
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 12; Non-ribosomal peptide synthetase; condensation domain protein; KEGG: pfl:PFL_3492 pyochelin synthetase F.
   
 
 0.615
Dtox_1721
PFAM: Fe-S cluster domain protein; KEGG: dat:HRM2_28540 hypothetical protein.
  
     0.524
Dtox_1322
6-deoxyerythronolide-B synthase; PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; KEGG: sde:Sde_3725 polyketide synthase modules and related proteins-like.
 
 
 
 0.503
Dtox_1326
KEGG: plu:plu3558 hypothetical protein.
  
     0.484
Dtox_3405
PFAM: Fe-S cluster domain protein; KEGG: dol:Dole_1915 Fe-S cluster domain-containing protein.
  
     0.479
Dtox_2841
KEGG: glo:Glov_1957 methyltransferase type 11.
 
    0.478
Dtox_2840
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pub:SAR11_0558 cyclopropane-fatty-acyl- phospholipid.
 
     0.475
Dtox_1981
PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: surface antigen BspA-like.
  
     0.473
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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