STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0386PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B. (198 aa)    
Predicted Functional Partners:
Dtox_0471
Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: bsu:BSU07580 two-component sensor histidine kinase.
 
  
  0.939
Dtox_3198
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3839 two-component sensor histidine kinase.
 
  
  0.937
Dtox_0401
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ent:Ent638_3378 signal transduction histidine kinase regulating citrate/malate metabolism.
 
  
  0.926
Dtox_0385
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH0397 sensory histidine kinase DcuS.
 
     0.833
Dtox_0384
Hypothetical protein.
       0.773
Dtox_0387
Hypothetical protein.
       0.686
Dtox_0892
SMART: Rhodanese domain protein; KEGG: abo:ABO_1993 rhodanese domain-containing protein.
  
     0.583
Dtox_0388
Two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: gme:Gmet_2697 LytR/AlgR family transcriptional regulator.
  
    0.577
Dtox_4154
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.558
Dtox_1362
KEGG: bha:BH1230 hypothetical protein.
  
     0.556
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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