STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0475PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pca:Pcar_0192 molybdopterin oxidoreductase/precorrin-4 methylase. (270 aa)    
Predicted Functional Partners:
Dtox_1295
PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: gbm:Gbem_3540 cobalamin (vitamin B12) biosynthesis CbiG protein.
 
 
 0.995
Dtox_1296
TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gme:Gmet_0485 cobyric acid synthase CobQ:precorrin-3B C17-methyltransferase region.
 
 
 0.995
Dtox_1298
PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: dal:Dalk_0445 precorrin-8X methylmutase CbiC/CobH.
 
  
 0.976
Dtox_1294
KEGG: dps:DP0222 precorrin-4 C11-methyltransferase (CobM); TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 
0.928
Dtox_1293
TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: geo:Geob_0033 precorrin-2 C20- methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.925
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.919
Dtox_1292
TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: geo:Geob_0032 precorrin-6y C5,15- methyltransferase (decarboxylating), CbiE subunit.
 
  
 0.916
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.897
Dtox_1297
TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: cvi:CV_1562 precorrin-3B C17- methyltransferase.
 
  
 0.893
Dtox_1291
TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: plu:plu2995 cobalt-precorrin-6Y C(5)- methyltransferase.
 
  
 0.865
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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