STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0515KEGG: bar:GBAA2786 glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain-containing protein; SMART: AAA ATPase; CBS domain-containing protein. (398 aa)    
Predicted Functional Partners:
Dtox_0516
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_0733 binding-protein-dependent transport systems inner membrane component.
 0.999
Dtox_0517
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bsu:BSU03000 glycine betaine ABC transporter (glycine betaine-binding protein).
 
 0.999
Dtox_0506
KEGG: pfo:Pfl01_1606 substrate-binding region of ABC-type glycine betaine transport system.
  
 
 0.936
Dtox_2808
PFAM: ABC-2 type transporter; KEGG: sat:SYN_00244 export ABC transporter permease protein.
 
      0.896
Dtox_3747
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sus:Acid_0085 ABC transporter related.
 
     
0.896
Dtox_3445
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.889
Dtox_2918
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein.
 
      0.883
Dtox_1042
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein.
 
      0.882
Dtox_4105
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_4858 protein of unknown function DUF214.
 
      0.751
Dtox_0345
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1158 hypothetical protein.
 
      0.700
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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