STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0556PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_0442 ABC transporter related. (264 aa)    
Predicted Functional Partners:
Dtox_0557
PFAM: transport system permease protein; KEGG: dps:DP0215 Fe(III) ABC-transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
Dtox_0555
PFAM: periplasmic binding protein; KEGG: dps:DP0217 Fe(III) ABC transporter, periplasmic substrate-binding protein.
 
 
 0.987
Dtox_0485
PFAM: transport system permease protein; ABC-3 protein; KEGG: dal:Dalk_5081 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.982
Dtox_0547
PFAM: periplasmic binding protein; KEGG: dal:Dalk_3523 periplasmic binding protein.
 
 
 0.957
Dtox_1956
PFAM: protein of unknown function DUF105; KEGG: bha:BH1587 iron(III) dicitrate transport system (permease).
     0.921
Dtox_0540
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0350 oligopeptide ABC transporter ATP- binding protein.
 
    
0.905
Dtox_0447
KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.903
Dtox_0348
KEGG: reh:H16_B1125 ABC-type transporter, ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.899
Dtox_3820
PFAM: inner-membrane translocator; KEGG: geo:Geob_2801 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
      0.899
Dtox_0371
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: avi:Avi_5352 ABC transporter nucleotide binding/ATPase protein (oligopeptide); TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.893
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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