STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0603KEGG: bha:BH3170 hypothetical protein. (108 aa)    
Predicted Functional Partners:
Dtox_0602
KEGG: hypothetical protein.
  
  
 0.870
Dtox_1648
PFAM: protein of unknown function DUF1657; KEGG: baa:BA_0231 hypothetical protein.
  
     0.754
Dtox_2607
TIGRFAM: stage III sporulation protein AE; KEGG: bar:GBAA4413 stage III sporulation protein AE.
  
     0.702
Dtox_2050
TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH1526 stage II sporulation protein M.
  
     0.684
Dtox_2091
KEGG: bsu:BSU29510 hypothetical protein.
  
     0.676
Dtox_2417
Sporulation protein YtaF; Probably functions as a manganese efflux pump.
  
     0.661
Dtox_2358
PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU10980 hypothetical protein.
  
    0.658
Dtox_1172
TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: bar:GBAA4138 hypothetical protein.
  
   
 0.653
Dtox_2697
KEGG: bsu:BSU16880 hypothetical protein.
  
     0.637
Dtox_2383
PFAM: protein of unknown function DUF1657; KEGG: baa:BA_0236 hypothetical protein.
  
     0.621
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.