STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0629PFAM: plasmid stabilization system; KEGG: ccv:CCV52592_0926 prophage LambdaSa04, RelE/ParE family protein. (102 aa)    
Predicted Functional Partners:
Dtox_0628
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.946
Dtox_0648
TIGRFAM: prevent-host-death family protein; KEGG: ccv:CCV52592_2220 prevent-host-death family protein.
 
     0.775
Dtox_2206
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.761
Dtox_4124
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.759
Dtox_4125
TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: gur:Gura_1263 plasmid stabilization system protein.
  
     0.753
Dtox_2209
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.752
Dtox_2783
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.705
Dtox_0867
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.685
Dtox_0961
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein; KEGG: baa:BA_1440 hypothetical protein.
  
     0.499
Dtox_0625
Hypothetical protein; KEGG: sfu:Sfum_2373 HPr kinase.
       0.482
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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