STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0679Hypothetical protein; KEGG: neu:NE0492 putative transposase. (309 aa)    
Predicted Functional Partners:
Dtox_3228
KEGG: cbg:CbuG_1666 hypothetical cytosolic protein.
  
     0.765
Dtox_2508
KEGG: bsu:BSU04940 hypothetical protein.
  
     0.637
Dtox_0861
PFAM: copper amine oxidase domain protein; KEGG: bar:GBAA4583 TolB domain-containing protein.
  
     0.584
Dtox_4028
KEGG: noc:Noc_1504 putative transposase.
  
     0.552
Dtox_4072
KEGG: noc:Noc_1504 putative transposase.
  
     0.550
Dtox_4156
Putative transmembrane anti-sigma factor; KEGG: sfu:Sfum_1326 hypothetical protein.
  
     0.543
Dtox_4014
KEGG: noc:Noc_1504 putative transposase.
  
     0.540
Dtox_4059
KEGG: noc:Noc_1504 putative transposase.
  
     0.535
Dtox_0740
Hypothetical protein; KEGG: mgm:Mmc1_1045 putative transposase.
  
     0.530
Dtox_0658
KEGG: neu:NE1223 putative transposase.
  
     0.528
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.