STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0802KEGG: bha:BH1414 hypothetical protein. (244 aa)    
Predicted Functional Partners:
Dtox_0801
PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; KEGG: acp:A2cp1_1204 domain of unknown function DUF1957; Belongs to the glycosyl hydrolase 57 family.
 
     0.951
Dtox_0787
PFAM: glycosyl transferase group 1; KEGG: bha:BH1415 hypothetical protein.
  
     0.710
Dtox_0788
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_0855 nucleotidyl transferase.
 
     0.633
Dtox_3107
Hypothetical protein.
  
     0.618
Dtox_0786
Hypothetical protein.
  
     0.603
Dtox_1650
KEGG: sun:SUN_0255 hypothetical protein.
  
     0.600
Dtox_2357
KEGG: bsu:BSU24440 hypothetical protein.
  
     0.590
Dtox_2705
Hypothetical protein; KEGG: sat:SYN_01761 pilin assembly protein.
  
     0.586
Dtox_3313
Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: bha:BH3839 two-component sensor histidine kinase.
  
     0.543
Dtox_4157
PFAM: S-layer domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; KEGG: ade:Adeh_3524 peptidase S8 and S53.
  
     0.525
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.