STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_0979KEGG: sat:SYN_00077 hypothetical protein. (273 aa)    
Predicted Functional Partners:
Dtox_0980
PFAM: transcriptional regulator PadR family protein; KEGG: sfu:Sfum_0276 transcriptional regulator, PadR- like family.
 
     0.871
Dtox_1397
PFAM: Protein of unknown function CGGC region; KEGG: dal:Dalk_2266 protein of unknown function CGGC region.
  
     0.732
Dtox_3448
TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_01690 putative molybdenum ABC-type transporter, permease subunit.
 
 
 0.709
Dtox_3445
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.658
Dtox_2361
Putative signal transduction protein with CBS domains; PFAM: CBS domain-containing protein; SMART: CBS domain-containing protein; KEGG: dal:Dalk_2240 response regulator receiver protein.
  
     0.522
Dtox_0404
PFAM: NifH/frxC-family protein; oxidoreductase/nitrogenase component 1; KEGG: dal:Dalk_0725 NifH/FrxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.521
Dtox_1015
PFAM: CBS domain-containing protein; SMART: CBS domain-containing protein; KEGG: dol:Dole_1341 response regulator receiver protein.
  
   
 0.514
Dtox_0985
PFAM: protein of unknown function UPF0153; KEGG: sun:SUN_1697 hypothetical protein.
 
     0.508
Dtox_0981
PFAM: protein of unknown function DUF81; KEGG: dvm:DvMF_2812 protein of unknown function DUF81.
       0.506
Dtox_2926
PFAM: protein of unknown function DUF81; KEGG: dvm:DvMF_2192 protein of unknown function DUF81.
 
     0.484
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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